Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycine c-acetyltransferase | NQ491_08700 | P0AB78 | + | 2152817 - 2154007 | 43463.4 |
| winged helix-turn-helix transcriptional regulator | NQ491_08705 | P0ACI8 | + | 2154084 - 2154560 | 17779.8 |
| 6-carboxytetrahydropterin synthase | NQ491_08710 | P44123 | + | 2154564 - 2155016 | 16931.2 |
| dna polymerase i | NQ491_08715 | P00582 | + | 2155286 - 2158105 | 104833.0 |
| port family protein | NQ491_08720 | Not Available | + | 2158280 - 2158858 | 21213.4 |
| alpha/beta hydrolase | NQ491_08725 | Q5UQ83 | - | 2159047 - 2160090 | 38240.5 |
| dihydrofolate reductase | NQ491_08730 | P12833 | - | 2160388 - 2160876 | 18739.4 |
| thymidylate synthase | NQ491_08735 | C1D070 | - | 2160873 - 2161667 | 30044.0 |
| udp-2,3-diacylglucosamine diphosphatase | NQ491_08740 | Q2SK43 | - | 2161673 - 2162419 | 28345.8 |
| ahpc/tsa family protein | NQ491_08745 | Q63DQ8 | - | 2162419 - 2163576 | 43386.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.