Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ491_08500 | Not Available | + | 2095630 - 2095908 | 11051.2 |
| rtec domain-containing protein | NQ491_08505 | Not Available | + | 2096458 - 2097018 | 21797.3 |
| type ii secretion system gsph family protein | NQ491_08510 | Q59589 | + | 2097641 - 2098051 | 15358.4 |
| hypothetical protein | NQ491_08515 | Not Available | + | 2098149 - 2098631 | 18266.1 |
| gspe/pule family protein | NQ491_08520 | P31741 | + | 2098628 - 2100292 | 61414.2 |
| type ii secretion system protein gspd | NQ491_08525 | P31772 | + | 2100405 - 2102291 | 68945.7 |
| piln domain-containing protein | NQ491_08530 | Not Available | + | 2102387 - 2103400 | 37686.4 |
| hypothetical protein | NQ491_08535 | Not Available | + | 2103397 - 2103891 | 18056.2 |
| hypothetical protein | NQ491_08540 | Not Available | + | 2103903 - 2104874 | 35286.9 |
| hypothetical protein | NQ491_08545 | Not Available | + | 2104871 - 2105332 | 16542.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.