Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fecr domain-containing protein | NQ491_08450 | Not Available | - | 2087655 - 2088689 | 39068.2 |
| rna polymerase sigma-70 factor | NQ491_08455 | P37978 | - | 2088798 - 2089385 | 23034.7 |
| response regulator transcription factor | NQ491_08460 | Q49YS9 | - | 2089659 - 2090273 | 22227.4 |
| hemerythrin domain-containing protein | NQ491_08465 | Not Available | - | 2090270 - 2090971 | 26615.8 |
| duf2023 family protein | NQ491_08470 | Not Available | - | 2091296 - 2091661 | 14198.6 |
| flavodoxin | NQ491_08475 | Q8ZQX1 | - | 2091658 - 2092167 | 18345.1 |
| gram domain-containing protein | NQ491_08480 | Not Available | - | 2092543 - 2093046 | 18621.8 |
| cation diffusion facilitator family transporter | NQ491_08485 | Q8ZQT3 | + | 2093489 - 2094391 | 32895.0 |
| Trna-ser | Not Available | Not Available | + | 2094691 - 2094782 | Not Available |
| hypothetical protein | NQ491_08495 | Not Available | + | 2095118 - 2095255 | 5602.69 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.