Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate 1-decarboxylase | NQ491_08400 | A6L8I7 | - | 2074010 - 2074363 | 12917.6 |
| pantoate--beta-alanine ligase | NQ491_08405 | A6L8I6 | - | 2074511 - 2075344 | 30814.0 |
| dipeptidyl peptidase 3 | NQ491_08410 | Q9NY33 | + | 2075516 - 2077504 | 75619.2 |
| lipoprotein signal peptidase | NQ491_08415 | B2RI39 | - | 2078074 - 2078673 | 22059.4 |
| hu family dna-binding protein | NQ491_08420 | Q9KV83 | - | 2079024 - 2079296 | 9321.59 |
| Trna-ser | Not Available | Not Available | + | 2079494 - 2079578 | Not Available |
| glycoside hydrolase family 99-like domain-containing protein | NQ491_08430 | P0C7J1 | - | 2079768 - 2080982 | 46016.1 |
| glycoside hydrolase family 99-like domain-containing protein | NQ491_08435 | B0RVK2 | - | 2080998 - 2082266 | 46527.8 |
| ragb/susd family nutrient uptake outer membrane protein | NQ491_08440 | A7LXT5 | - | 2082351 - 2084117 | 67893.8 |
| tonb-dependent receptor | NQ491_08445 | Q8A1G1 | - | 2084131 - 2087457 | 123340.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.