Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ491_08350 | Not Available | - | 2060292 - 2060771 | 18209.8 |
| glycoside hydrolase family 43 protein | NQ491_08355 | P49943 | + | 2061278 - 2062351 | 39790.1 |
| family 43 glycosylhydrolase | NQ491_08360 | P48790 | + | 2062376 - 2063695 | 48777.8 |
| glycosyl hydrolase | NQ491_08365 | T2KNA8 | - | 2064264 - 2067518 | 119708.0 |
| hypothetical protein | NQ491_08370 | Not Available | - | 2067829 - 2069637 | 69107.4 |
| dna methyltransferase | NQ491_08375 | P14244 | - | 2069976 - 2071220 | 47895.0 |
| xre family transcriptional regulator | NQ491_08380 | Not Available | + | 2071323 - 2071616 | 11362.8 |
| mvai/bcni family restriction endonuclease | NQ491_08385 | Not Available | + | 2071606 - 2072352 | 28711.3 |
| glycerophosphodiester phosphodiesterase | NQ491_08390 | P54527 | + | 2072580 - 2073350 | 28225.8 |
| Trna-thr | Not Available | Not Available | + | 2073631 - 2073703 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.