Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rlua family pseudouridine synthase | NQ491_08250 | O50310 | - | 2032370 - 2033443 | 40638.5 |
| pasta domain-containing protein | NQ491_08255 | Q8R9T6 | - | 2033451 - 2034335 | 31969.5 |
| cofh family radical sam protein | NQ491_08260 | Q5SK48 | - | 2034632 - 2035732 | 41130.0 |
| 50s ribosomal protein l34 | NQ491_08265 | Q5LI34 | - | 2035801 - 2035956 | 6085.48 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | NQ491_08270 | Q11VU7 | - | 2036142 - 2036765 | 23368.2 |
| polyprenyl synthetase family protein | NQ491_08275 | O24743 | - | 2036849 - 2037838 | 36908.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | NQ491_08280 | Q8GXU8 | + | 2038176 - 2038901 | 27767.5 |
| type iia dna topoisomerase subunit b | NQ491_08285 | Q59189 | + | 2038961 - 2040814 | 69498.5 |
| dna gyrase/topoisomerase iv subunit a | NQ491_08290 | O51066 | + | 2040840 - 2043740 | 107889.0 |
| shikimate kinase | NQ491_08295 | Q8A2B2 | + | 2043847 - 2044395 | 20580.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.