Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease p protein component | NQ491_08200 | Q7MXI4 | - | 2021061 - 2021456 | 14795.2 |
| uroporphyrinogen-iii synthase | NQ491_08205 | Not Available | - | 2021487 - 2022422 | 34421.1 |
| duf4271 domain-containing protein | NQ491_08210 | Not Available | - | 2022526 - 2023338 | 29634.4 |
| atp-binding protein | NQ491_08215 | P16497 | - | 2023354 - 2024514 | 43568.1 |
| s41 family peptidase | NQ491_08220 | Q44879 | - | 2024524 - 2026197 | 62211.2 |
| hypothetical protein | NQ491_08225 | Not Available | - | 2026276 - 2026737 | 17173.3 |
| 5-formyltetrahydrofolate cyclo-ligase | NQ491_08230 | P44905 | - | 2027033 - 2027629 | 22905.5 |
| succinate dehydrogenase/fumarate reductase cytochrome b subunit | NQ491_08235 | Not Available | + | 2027823 - 2028527 | 25962.1 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | NQ491_08240 | P08065 | + | 2028577 - 2030520 | 71959.8 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | NQ491_08245 | P08066 | + | 2030567 - 2031310 | 26696.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.