Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadp-dependent malic enzyme | NQ491_08150 | O30808 | + | 2007060 - 2009339 | 82865.1 |
| m64 family metallopeptidase | NQ491_08155 | Not Available | + | 2010033 - 2010437 | 15141.9 |
| dna-deoxyinosine glycosylase | NQ491_08160 | Q46EH7 | - | 2010638 - 2011156 | 19250.3 |
| m64 family metallo-endopeptidase | NQ491_08165 | Not Available | - | 2011556 - 2013475 | 70527.2 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | NQ491_08170 | A6LIB3 | - | 2013625 - 2014509 | 32470.9 |
| (d)cmp kinase | NQ491_08175 | Q5L9K4 | - | 2014494 - 2015213 | 26488.9 |
| lyse family transporter | NQ491_08180 | P94381 | - | 2015197 - 2015853 | 23621.8 |
| apolipoprotein n-acyltransferase | NQ491_08185 | Q8KCC4 | + | 2016334 - 2017917 | 59681.2 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | NQ491_08190 | Q05865 | + | 2018280 - 2019569 | 47415.8 |
| membrane protein insertion efficiency factor yidd | NQ491_08195 | Q5LJ21 | - | 2020674 - 2020928 | 9770.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.