Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ491_08050 | Not Available | - | 1986158 - 1986613 | 17290.0 |
| hypothetical protein | NQ491_08055 | Not Available | - | 1986778 - 1987341 | 22696.5 |
| hypothetical protein | NQ491_08060 | Not Available | + | 1988378 - 1988701 | 11760.1 |
| hypothetical protein | NQ491_08065 | Not Available | + | 1989125 - 1990036 | 35209.0 |
| type ii toxin-antitoxin system pard family antitoxin | NQ491_08070 | P58091 | + | 1990190 - 1990438 | 9103.72 |
| type ii toxin-antitoxin system rele/pare family toxin | NQ491_08075 | Q9A9T8 | + | 1990431 - 1990730 | 11661.0 |
| hypothetical protein | NQ491_08080 | Not Available | + | 1991064 - 1991348 | 11131.2 |
| hypothetical protein | NQ491_08085 | Not Available | + | 1991740 - 1992102 | 14257.2 |
| pl29 family lyase n-terminal domain-containing protein | NQ491_08090 | Not Available | + | 1992105 - 1994744 | 96505.4 |
| Trna-pseudo | Not Available | Not Available | + | 1995626 - 1995730 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.