Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucine--trna ligase | NQ491_08000 | B2RIZ3 | + | 1971173 - 1973935 | 105612.0 |
| hypothetical protein | NQ491_08005 | Not Available | - | 1974651 - 1976849 | 80357.4 |
| Trna-arg | Not Available | Not Available | + | 1977461 - 1977534 | Not Available |
| lipoyl synthase | NQ491_08015 | A6LE09 | + | 1977881 - 1978765 | 33054.8 |
| lipoyl(octanoyl) transferase lipb | NQ491_08020 | Q8A8S8 | + | 1978830 - 1979450 | 22793.3 |
| single-stranded-dna-specific exonuclease recj | NQ491_08025 | O32044 | + | 1979516 - 1981282 | 65622.0 |
| patb family c-s lyase | NQ491_08030 | Q08432 | - | 1981869 - 1983071 | 45838.7 |
| pseudouridine synthase | NQ491_08035 | P35159 | + | 1983208 - 1984542 | 50974.6 |
| Trna-lys | Not Available | Not Available | + | 1984647 - 1984719 | Not Available |
| site-specific integrase | NQ491_08045 | Q9V1P5 | + | 1984887 - 1986095 | 46423.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.