Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| malate dehydrogenase | NQ491_07850 | Q20XN0 | + | 1936303 - 1937304 | 36228.6 |
| hypothetical protein | NQ491_07855 | Not Available | - | 1937746 - 1937910 | 6314.22 |
| Trna-met | Not Available | Not Available | + | 1938381 - 1938453 | Not Available |
| (fe-s)-binding protein | NQ491_07865 | Q0AZ32 | - | 1938738 - 1940579 | 68600.9 |
| 4fe-4s dicluster domain-containing protein | NQ491_07870 | Not Available | - | 1940833 - 1941159 | 12217.1 |
| fad-dependent oxidoreductase | NQ491_07875 | P60200 | - | 1941164 - 1942183 | 37502.2 |
| heterodisulfide reductase-related iron-sulfur binding cluster | NQ491_07880 | Q8TXT8 | - | 1942188 - 1943255 | 40339.1 |
| 4fe-4s dicluster domain-containing protein | NQ491_07885 | Q8TLB1 | - | 1943338 - 1944039 | 26527.1 |
| amidohydrolase family protein | NQ491_07890 | O25046 | - | 1944448 - 1945596 | 42198.2 |
| duf4296 domain-containing protein | NQ491_07895 | Not Available | - | 1945511 - 1946428 | 34911.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.