Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| manganese efflux pump mntp family protein | NQ491_07800 | Q3A2U7 | - | 1923068 - 1923685 | 21644.5 |
| excinuclease abc subunit uvrb | NQ491_07805 | Q5LC24 | + | 1923753 - 1925774 | 76106.7 |
| gtra family protein | NQ491_07810 | Not Available | + | 1925771 - 1926274 | 19173.0 |
| m23 family metallopeptidase | NQ491_07815 | Q56131 | - | 1926646 - 1927689 | 38377.9 |
| thioredoxin-disulfide reductase | NQ491_07820 | P0A9P5 | + | 1927879 - 1928808 | 32814.2 |
| acyltransferase | NQ491_07825 | P14286 | + | 1928820 - 1929782 | 36339.5 |
| hypothetical protein | NQ491_07830 | Not Available | - | 1930379 - 1931542 | 44803.6 |
| glycosyltransferase | NQ491_07835 | D4GYH3 | - | 1931977 - 1932909 | 34895.0 |
| aminoglycoside phosphotransferase family protein | NQ491_07840 | E8MF12 | - | 1933508 - 1934596 | 41589.4 |
| gfo/idh/moca family oxidoreductase | NQ491_07845 | Q5LGW9 | - | 1934666 - 1936063 | 52291.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.