Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | NQ491_07700 | A0A0H2URH7 | - | 1897306 - 1898283 | 37389.1 |
| hypothetical protein | NQ491_07705 | Not Available | - | 1898295 - 1899674 | 52233.9 |
| hypothetical protein | NQ491_07710 | Not Available | - | 1899671 - 1901020 | 51865.1 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | NQ491_07715 | P52641 | - | 1901513 - 1902682 | 43780.0 |
| coenzyme f420 hydrogenase/dehydrogenase, beta subunit c-terminal domain | NQ491_07720 | Not Available | - | 1902795 - 1903994 | 45954.9 |
| polysaccharide pyruvyl transferase family protein | NQ491_07725 | Not Available | - | 1903998 - 1905095 | 41795.1 |
| polysaccharide biosynthesis c-terminal domain-containing protein | NQ491_07730 | P39855 | - | 1905103 - 1906503 | 52669.5 |
| dtdp-glucose 4,6-dehydratase | NQ491_07735 | P26391 | - | 1907425 - 1908555 | 43161.9 |
| dtdp-4-dehydrorhamnose reductase | NQ491_07740 | O66251 | - | 1908552 - 1909421 | 32601.8 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | NQ491_07745 | P26394 | - | 1909418 - 1909993 | 21893.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.