Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ491_07650 | Not Available | + | 1889449 - 1889622 | 6623.23 |
| plasmid mobilization relaxosome protein mobc | NQ491_07655 | Not Available | + | 1889623 - 1889805 | 6874.55 |
| relaxase/mobilization nuclease domain-containing protein | NQ491_07660 | P22898 | + | 1889795 - 1890871 | 40413.5 |
| hypothetical protein | NQ491_07665 | Not Available | + | 1890875 - 1891387 | 19526.2 |
| hypothetical protein | NQ491_07670 | Not Available | + | 1891481 - 1891681 | 8078.59 |
| wxcm-like domain-containing protein | NQ491_07675 | Not Available | - | 1892523 - 1892975 | 17146.3 |
| glycosyltransferase family 4 protein | NQ491_07680 | Q8KIU8 | - | 1892968 - 1894170 | 46299.2 |
| sdr family oxidoreductase | NQ491_07685 | P26392 | - | 1894167 - 1894994 | 30854.8 |
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | NQ491_07690 | Q6LZC4 | - | 1895054 - 1896184 | 43161.2 |
| polysaccharide biosynthesis protein | NQ491_07695 | Q4UM33 | - | 1896207 - 1897280 | 40246.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.