Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bacon domain-containing protein | NQ491_07400 | Not Available | - | 1826726 - 1828699 | 71054.8 |
| hypothetical protein | NQ491_07405 | Q9ZFM2 | + | 1829090 - 1830544 | 54098.7 |
| yjjg family noncanonical pyrimidine nucleotidase | NQ491_07410 | O06480 | - | 1830994 - 1831683 | 26005.1 |
| dna alkylation repair protein | NQ491_07415 | Not Available | + | 1831882 - 1832562 | 25380.5 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | NQ491_07420 | O05515 | - | 1832910 - 1833326 | 15579.4 |
| pglz domain-containing protein | NQ491_07425 | P13792 | - | 1833665 - 1835218 | 59339.8 |
| integration host factor subunit beta | NQ491_07430 | P19436 | + | 1835675 - 1835959 | 10279.5 |
| rne/rng family ribonuclease | NQ491_07435 | P45175 | + | 1836246 - 1837790 | 58018.8 |
| transcription-repair coupling factor | NQ491_07440 | P37474 | + | 1837798 - 1841151 | 125510.0 |
| type iii pantothenate kinase | NQ491_07445 | A0M5N3 | + | 1841220 - 1841954 | 27032.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.