Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | NQ491_07350 | P55293 | + | 1814311 - 1815417 | 42204.6 |
| lipopolysaccharide biosynthesis protein | NQ491_07355 | Not Available | + | 1815431 - 1816963 | 57104.0 |
| sdr family oxidoreductase | NQ491_07360 | Q9MYP6 | + | 1817023 - 1817823 | 28996.8 |
| thiamine pyrophosphate-binding protein | NQ491_07365 | Q5LFS5 | + | 1817857 - 1819602 | 64988.9 |
| polysaccharide pyruvyl transferase family protein | NQ491_07370 | Not Available | + | 1819616 - 1820713 | 42087.5 |
| glycosyltransferase family 4 protein | NQ491_07375 | Q0P9C9 | + | 1820726 - 1821832 | 42909.5 |
| epsg family protein | NQ491_07380 | Not Available | + | 1821855 - 1822901 | 39186.5 |
| glycosyltransferase family 2 protein | NQ491_07385 | P22639 | + | 1822922 - 1823635 | 27287.8 |
| nad-dependent epimerase/dehydratase family protein | NQ491_07390 | Q2SYH7 | + | 1823644 - 1824780 | 41831.7 |
| hypothetical protein | NQ491_07395 | Not Available | + | 1825205 - 1826197 | 39222.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.