Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ491_07300 | Not Available | + | 1802639 - 1803076 | 17207.6 |
| site-specific integrase | NQ491_07305 | Not Available | - | 1803261 - 1804661 | 54904.4 |
| tyrosine-type recombinase/integrase | NQ491_07310 | Not Available | + | 1805244 - 1806300 | 37675.6 |
| tyrosine-type recombinase/integrase | NQ491_07315 | Q8R890 | - | 1806464 - 1806655 | 7376.05 |
| site-specific integrase | NQ491_07320 | Not Available | + | 1807488 - 1808759 | 48708.1 |
| transcriptional regulator | NQ491_07325 | Not Available | + | 1809261 - 1810310 | 40774.0 |
| hypothetical protein | NQ491_07330 | Not Available | + | 1810490 - 1810885 | 14965.9 |
| glucose-1-phosphate thymidylyltransferase rfba | NQ491_07335 | P55255 | + | 1811060 - 1811953 | 32869.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | NQ491_07340 | P26394 | + | 1812820 - 1813395 | 21878.7 |
| nad(p)-dependent oxidoreductase | NQ491_07345 | O66256 | + | 1813447 - 1814295 | 31624.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.