Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | NQ491_07250 | Q8G0Y6 | - | 1789567 - 1790880 | 49370.8 |
| efflux rnd transporter permease subunit | NQ491_07255 | Q7N3E2 | - | 1790886 - 1794032 | 115849.0 |
| efflux rnd transporter periplasmic adaptor subunit | NQ491_07260 | D3V7P2 | - | 1794032 - 1795093 | 38806.6 |
| helix-turn-helix transcriptional regulator | NQ491_07265 | P11765 | + | 1795264 - 1796175 | 34714.5 |
| plasmid recombination protein | NQ491_07270 | P15255 | - | 1796619 - 1798073 | 55282.2 |
| toprim domain-containing protein | NQ491_07275 | P52308 | - | 1798292 - 1799281 | 37244.4 |
| duf5906 domain-containing protein | NQ491_07280 | Not Available | - | 1799465 - 1800670 | 47225.7 |
| helix-turn-helix domain-containing protein | NQ491_07285 | Not Available | - | 1800663 - 1800968 | 11457.9 |
| magnesium transporter | NQ491_07290 | Not Available | - | 1801112 - 1801825 | 27064.2 |
| duf3800 domain-containing protein | NQ491_07295 | Not Available | + | 1801959 - 1802636 | 26624.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.