Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ491_07050 | P12608 | - | 1740005 - 1741231 | 43730.6 |
| hypothetical protein | NQ491_07055 | O67300 | - | 1741301 - 1742602 | 48506.4 |
| tolc family protein | NQ491_07060 | Q03027 | + | 1743277 - 1744749 | 54299.2 |
| biotin/lipoyl-binding protein | NQ491_07065 | Q9ZJD1 | + | 1744765 - 1745760 | 36807.4 |
| abc transporter permease | NQ491_07070 | Not Available | + | 1745773 - 1746945 | 43548.6 |
| abc transporter permease | NQ491_07075 | Not Available | + | 1746929 - 1748212 | 47118.1 |
| lipopolysaccharide kinase inaa family protein | NQ491_07080 | Not Available | - | 1748148 - 1748948 | 30910.5 |
| duf362 domain-containing protein | NQ491_07085 | Not Available | + | 1749386 - 1750354 | 34603.1 |
| duf1893 domain-containing protein | NQ491_07090 | Not Available | + | 1750578 - 1750991 | 14734.8 |
| ecf transporter s component | NQ491_07095 | Not Available | + | 1751002 - 1751514 | 18537.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.