Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| winged helix dna-binding domain-containing protein | NQ491_06950 | Not Available | + | 1713129 - 1714190 | 39938.8 |
| rrna cytosine-c5-methylase | NQ491_06955 | B2VJ83 | - | 1714557 - 1715927 | 50594.1 |
| deoxynucleoside kinase | NQ491_06960 | P37529 | - | 1715927 - 1716538 | 23227.5 |
| glycosyltransferase | NQ491_06965 | D4GU66 | - | 1717130 - 1718305 | 44343.5 |
| gh3 auxin-responsive promoter family protein | NQ491_06970 | A3BLS0 | - | 1718302 - 1719825 | 57402.6 |
| trk system potassium transporter trka | NQ491_06975 | P0AGJ0 | - | 1719875 - 1721215 | 48837.0 |
| hypothetical protein | NQ491_06980 | Not Available | - | 1721212 - 1721685 | 16539.7 |
| hypothetical protein | NQ491_06985 | Not Available | + | 1721826 - 1722113 | 10020.0 |
| glycosyltransferase family 2 protein | NQ491_06990 | Q9XC90 | + | 1722542 - 1723294 | 28945.8 |
| hypothetical protein | NQ491_06995 | Not Available | - | 1723504 - 1724253 | 28441.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.