Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase family protein | NQ491_06900 | Q8DP63 | + | 1697468 - 1698076 | 23681.5 |
| ubix family flavin prenyltransferase | NQ491_06905 | O58742 | + | 1698082 - 1698681 | 21221.4 |
| holliday junction branch migration dna helicase ruvb | NQ491_06910 | A6KZW5 | + | 1698725 - 1699729 | 36723.4 |
| duf3467 domain-containing protein | NQ491_06915 | Not Available | - | 1700233 - 1700550 | 11488.0 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | NQ491_06920 | P9WH76 | - | 1701131 - 1703716 | 97426.4 |
| dihydroneopterin aldolase | NQ491_06925 | P28823 | - | 1703848 - 1704225 | 14358.3 |
| atp-dependent chaperone clpb | NQ491_06930 | Q89YY3 | - | 1704744 - 1707341 | 96901.0 |
| dna polymerase iii subunit gamma/tau | NQ491_06935 | P09122 | + | 1707874 - 1709937 | 73142.8 |
| tyrosine--trna ligase | NQ491_06940 | Q650K7 | + | 1710281 - 1711573 | 48422.2 |
| aspartate--ammonia ligase | NQ491_06945 | A6LI95 | + | 1711585 - 1712622 | 39345.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.