Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| na/pi symporter | NQ491_06700 | P0AF43 | - | 1637823 - 1639460 | 57451.7 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | NQ491_06705 | Q98D61 | - | 1639560 - 1640381 | 29637.7 |
| prolyl oligopeptidase family serine peptidase | NQ491_06710 | Q06903 | + | 1640673 - 1642799 | 78720.6 |
| aspartate kinase | NQ491_06715 | P49079 | + | 1643220 - 1644482 | 47166.6 |
| nad-dependent epimerase/dehydratase family protein | NQ491_06720 | Q8NBZ7 | - | 1644660 - 1645643 | 36699.3 |
| glucose/galactose mfs transporter | NQ491_06725 | Q2YIJ8 | - | 1645765 - 1646967 | 42742.6 |
| galactose mutarotase | NQ491_06730 | P05149 | - | 1647136 - 1648188 | 39215.8 |
| sugar phosphate nucleotidyltransferase | NQ491_06735 | Q9F664 | - | 1648365 - 1649279 | 34454.2 |
| m23 family metallopeptidase | NQ491_06740 | P37690 | + | 1649548 - 1650423 | 32456.2 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | NQ491_06745 | Q64PY9 | + | 1650486 - 1651640 | 42045.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.