Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| yjbh domain-containing protein | NQ491_06650 | Not Available | - | 1626567 - 1627784 | 46288.4 |
| Trna-ser | Not Available | Not Available | + | 1628384 - 1628474 | Not Available |
| hypothetical protein | NQ491_06660 | Not Available | - | 1629012 - 1630613 | 58933.4 |
| citrate/2-methylcitrate synthase | NQ491_06665 | D4GS06 | - | 1630885 - 1632240 | 51503.0 |
| nadp-dependent isocitrate dehydrogenase | NQ491_06670 | Q5HNL1 | - | 1632305 - 1633567 | 45708.9 |
| deoxyribose-phosphate aldolase | NQ491_06675 | Q19264 | - | 1633670 - 1634548 | 31441.7 |
| port family protein | NQ491_06680 | Not Available | - | 1634702 - 1635544 | 32028.7 |
| hypothetical protein | NQ491_06685 | Not Available | - | 1635552 - 1636457 | 32717.1 |
| rna polymerase sigma factor | NQ491_06690 | O05404 | - | 1636457 - 1636945 | 18968.8 |
| biotin--[acetyl-coa-carboxylase] ligase | NQ491_06695 | P0CI75 | - | 1636995 - 1637810 | 30277.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.