Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tatd family hydrolase | NQ491_06600 | P37545 | - | 1616120 - 1616917 | 29855.7 |
| dna-processing protein dpra | NQ491_06605 | P43862 | - | 1616911 - 1618032 | 40483.7 |
| Trna-cys | Not Available | Not Available | + | 1618424 - 1618494 | Not Available |
| isoprenylcysteine carboxylmethyltransferase family protein | NQ491_06615 | Not Available | - | 1618645 - 1619409 | 28227.2 |
| phosphatase pap2 family protein | NQ491_06620 | Q8A6M3 | - | 1619406 - 1620002 | 22493.6 |
| mboat family protein | NQ491_06625 | Q51392 | - | 1620386 - 1621885 | 57231.2 |
| hypothetical protein | NQ491_06630 | Not Available | + | 1622817 - 1623041 | 8696.5 |
| ompa family protein | NQ491_06635 | Q9S3R8 | - | 1623097 - 1624314 | 44939.3 |
| yjbh domain-containing protein | NQ491_06640 | Not Available | - | 1624330 - 1625181 | 30964.1 |
| carboxypeptidase regulatory-like domain-containing protein | NQ491_06645 | Not Available | - | 1625228 - 1626556 | 46600.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.