Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i dna topoisomerase | NQ491_06500 | Q87AQ6 | - | 1590762 - 1593065 | 85619.5 |
| duf4270 domain-containing protein | NQ491_06505 | Not Available | - | 1593215 - 1594597 | 51221.8 |
| glycogen/starch synthase | NQ491_06510 | B4S584 | - | 1594590 - 1595408 | 31733.0 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | NQ491_06515 | A6KZK0 | - | 1595503 - 1596552 | 39926.2 |
| trna pseudouridine(55) synthase trub | NQ491_06520 | A6KZJ9 | - | 1596689 - 1597426 | 27569.2 |
| undecaprenyl-diphosphate phosphatase | NQ491_06525 | Q5LJ30 | - | 1597439 - 1598236 | 28317.2 |
| duf3098 domain-containing protein | NQ491_06530 | Not Available | - | 1598240 - 1598506 | 9928.47 |
| phosphatidylethanolamine n-methyltransferase family protein | NQ491_06535 | Not Available | - | 1598514 - 1598990 | 17540.3 |
| abc transporter permease | NQ491_06540 | A5FMG4 | - | 1599008 - 1599889 | 32627.4 |
| yfho family protein | NQ491_06545 | Not Available | - | 1599870 - 1602320 | 89860.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.