Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | NQ491_06450 | O07523 | - | 1579670 - 1580965 | 47396.0 |
| atp-binding cassette domain-containing protein | NQ491_06455 | C0SPB4 | - | 1580994 - 1581917 | 34361.9 |
| class i mannose-6-phosphate isomerase | NQ491_06460 | O31646 | + | 1582080 - 1583048 | 36114.3 |
| dcmp deaminase family protein | NQ491_06465 | P16006 | + | 1583068 - 1583508 | 16248.5 |
| duf4435 domain-containing protein | NQ491_06470 | Not Available | + | 1583543 - 1584607 | 41982.0 |
| serine acetyltransferase | NQ491_06475 | Q59967 | + | 1584604 - 1585413 | 30294.9 |
| sulfatase-like hydrolase/transferase | NQ491_06480 | P44135 | + | 1585421 - 1587409 | 74835.8 |
| aminoacyl-histidine dipeptidase | NQ491_06485 | P15288 | - | 1587696 - 1589150 | 53336.7 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | NQ491_06490 | C1DSS0 | + | 1589221 - 1589709 | 17715.5 |
| hypothetical protein | NQ491_06495 | Not Available | - | 1590232 - 1590735 | 18511.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.