Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf5036 family protein | NQ491_06400 | Not Available | - | 1567703 - 1568404 | 24870.2 |
| methionine--trna ligase | NQ491_06405 | A6LFP0 | + | 1568832 - 1570871 | 76793.0 |
| branched-chain amino acid aminotransferase | NQ491_06410 | P54689 | + | 1570955 - 1571974 | 37700.8 |
| hypothetical protein | NQ491_06415 | Not Available | + | 1572411 - 1573061 | 24618.9 |
| haloacid dehalogenase-like hydrolase | NQ491_06420 | O51040 | + | 1573525 - 1574370 | 32669.8 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | NQ491_06425 | Q64MG2 | + | 1574499 - 1575080 | 21133.0 |
| dna repair protein reco | NQ491_06430 | Q8A275 | + | 1575080 - 1575805 | 27703.0 |
| haloacid dehalogenase-like hydrolase | NQ491_06435 | P9WGJ3 | + | 1576130 - 1577065 | 35116.9 |
| udp-glucose 4-epimerase gale | NQ491_06440 | Q553X7 | - | 1577524 - 1578549 | 37553.9 |
| tetratricopeptide repeat protein | NQ491_06445 | Not Available | - | 1578693 - 1579688 | 37101.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.