Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ491_06200 | Not Available | + | 1523187 - 1524746 | 55191.5 |
| rna polymerase sigma factor rpod/siga | NQ491_06205 | O66381 | - | 1525719 - 1526579 | 32590.0 |
| trypsin-like peptidase domain-containing protein | NQ491_06210 | A6VUA4 | - | 1526697 - 1528187 | 52852.8 |
| methionine adenosyltransferase | NQ491_06215 | A6KZL1 | - | 1528679 - 1529971 | 46997.8 |
| bama/tama family outer membrane protein | NQ491_06220 | Q9K1H0 | - | 1530191 - 1532512 | 88645.2 |
| hypothetical protein | NQ491_06225 | O58307 | - | 1532626 - 1533084 | 16968.3 |
| pyridoxamine 5'-phosphate oxidase family protein | NQ491_06230 | Not Available | - | 1533225 - 1533635 | 15212.1 |
| nitroreductase family protein | NQ491_06235 | P39605 | - | 1533727 - 1534473 | 28252.8 |
| diaminopimelate epimerase | NQ491_06240 | A6GYX5 | + | 1534628 - 1535467 | 30272.9 |
| hypothetical protein | NQ491_06245 | Not Available | + | 1535554 - 1535769 | 8161.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.