Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta | NQ491_06050 | A6LE81 | - | 1481342 - 1485160 | 142887.0 |
| 50s ribosomal protein l7/l12 | NQ491_06055 | Q11QA4 | - | 1485423 - 1485800 | 12824.3 |
| 50s ribosomal protein l10 | NQ491_06060 | A0M3Z1 | - | 1485922 - 1486443 | 19082.4 |
| 50s ribosomal protein l1 | NQ491_06065 | B2RL48 | - | 1486454 - 1487152 | 25051.8 |
| 50s ribosomal protein l11 | NQ491_06070 | Q5L893 | - | 1487172 - 1487612 | 15700.2 |
| transcription termination/antitermination protein nusg | NQ491_06075 | P65591 | - | 1487629 - 1488186 | 20944.2 |
| preprotein translocase subunit sece | NQ491_06080 | Not Available | - | 1488212 - 1488403 | 7206.94 |
| Trna-trp | Not Available | Not Available | + | 1488417 - 1488490 | Not Available |
| elongation factor tu | NQ491_06090 | B2RL52 | - | 1488537 - 1489724 | 43370.3 |
| Trna-gly | Not Available | Not Available | + | 1489834 - 1489906 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.