Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf421 domain-containing protein | NQ491_05750 | O31533 | - | 1419754 - 1420428 | 25133.7 |
| trna 2-thiouridine(34) synthase mnma | NQ491_05755 | A0M3J2 | - | 1420840 - 1422015 | 43996.7 |
| endopeptidase la | NQ491_05760 | A5FG89 | - | 1422114 - 1424546 | 90439.2 |
| cellulase | NQ491_05765 | Not Available | + | 1424709 - 1425518 | 30981.1 |
| valine--trna ligase | NQ491_05770 | A6LIG7 | + | 1425576 - 1428206 | 100737.0 |
| pld nuclease n-terminal domain-containing protein | NQ491_05775 | Not Available | + | 1428754 - 1429203 | 16382.4 |
| hypothetical protein | NQ491_05780 | Not Available | - | 1429296 - 1430273 | 36965.0 |
| duf3108 domain-containing protein | NQ491_05785 | Not Available | - | 1430309 - 1431133 | 31287.0 |
| atp-dependent dna helicase recg | NQ491_05790 | Q55681 | - | 1431219 - 1433327 | 78811.5 |
| (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | NQ491_05795 | A6LGR5 | + | 1433405 - 1435015 | 58565.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.