Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | NQ491_05700 | A6L7T5 | - | 1407700 - 1408362 | 24824.7 |
| helix-turn-helix domain-containing protein | NQ491_05705 | Q47587 | - | 1408386 - 1409057 | 24845.2 |
| hypothetical protein | NQ491_05710 | Not Available | + | 1409267 - 1409545 | 11125.1 |
| hypothetical protein | NQ491_05715 | Not Available | + | 1409876 - 1410247 | 13559.9 |
| phage terminase large subunit | NQ491_05720 | Not Available | + | 1410731 - 1412179 | 54645.7 |
| arac family transcriptional regulator | NQ491_05725 | Q05587 | - | 1412564 - 1413502 | 35922.7 |
| adenosylmethionine--8-amino-7-oxononanoate transaminase | NQ491_05730 | E1WTS4 | + | 1413814 - 1415106 | 47866.9 |
| radical sam protein | NQ491_05735 | C0QX49 | + | 1415810 - 1416583 | 28452.4 |
| duf2029 domain-containing protein | NQ491_05740 | Not Available | + | 1416612 - 1417796 | 45267.2 |
| peptide chain release factor 2 | NQ491_05745 | A8AY61 | + | 1417999 - 1419085 | 41137.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.