Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l25/general stress protein ctc | NQ491_05650 | B2RHF3 | + | 1399832 - 1400425 | 21286.1 |
| aminoacyl-trna hydrolase | NQ491_05655 | A6L6X1 | + | 1400516 - 1401079 | 20142.2 |
| rna-binding s4 domain-containing protein | NQ491_05660 | P0ACH0 | + | 1401090 - 1401500 | 15736.7 |
| hypothetical protein | NQ491_05665 | Not Available | - | 1401653 - 1401790 | 5482.46 |
| sigma-70 family rna polymerase sigma factor | NQ491_05670 | A0PNM4 | - | 1401848 - 1402438 | 23060.9 |
| c4-type zinc ribbon domain-containing protein | NQ491_05675 | Not Available | - | 1402703 - 1403479 | 29231.9 |
| nif3-like dinuclear metal center hexameric protein | NQ491_05680 | Q8XIV9 | - | 1403495 - 1404280 | 27820.5 |
| tyrosine-type recombinase/integrase | NQ491_05685 | P33358 | - | 1404831 - 1405169 | 13325.4 |
| riboflavin kinase | NQ491_05690 | P94465 | + | 1405422 - 1405805 | 14260.9 |
| adenosylhomocysteinase | NQ491_05695 | Q64MT2 | + | 1405845 - 1407257 | 52323.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.