Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | NQ491_05500 | Not Available | + | 1370391 - 1371950 | 57383.2 |
| response regulator transcription factor | NQ491_05505 | P54662 | - | 1372221 - 1372874 | 23838.9 |
| histidine kinase | NQ491_05510 | Q4L8Q7 | - | 1372888 - 1373829 | 35064.2 |
| 50s ribosomal protein l19 | NQ491_05515 | A6LEF2 | - | 1374028 - 1374390 | 13740.0 |
| nitroreductase | NQ491_05520 | O28017 | - | 1374756 - 1375283 | 19388.6 |
| 5'/3'-nucleotidase sure | NQ491_05525 | A6H213 | + | 1375619 - 1376482 | 32125.3 |
| duf2812 domain-containing protein | NQ491_05530 | Not Available | + | 1376503 - 1376898 | 15750.8 |
| cysteine--trna ligase | NQ491_05535 | Q5LIT7 | - | 1377022 - 1378488 | 55420.1 |
| duf2723 domain-containing protein | NQ491_05540 | Q9NX78 | + | 1378659 - 1381721 | 115937.0 |
| ribonuclease hii | NQ491_05545 | Q64ZN7 | + | 1381820 - 1382443 | 23381.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.