Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | NQ491_05450 | Not Available | - | 1355961 - 1356680 | 27893.6 |
| s1/p1 nuclease | NQ491_05455 | F4JJL0 | - | 1357068 - 1357850 | 30166.9 |
| hypothetical protein | NQ491_05460 | Not Available | + | 1358282 - 1360684 | 87438.4 |
| 5s ribosomal rna | Not Available | Not Available | + | 1361431 - 1361543 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | + | 1361638 - 1364506 | Not Available |
| Trna-ala | Not Available | Not Available | + | 1364617 - 1364693 | Not Available |
| Trna-ile | Not Available | Not Available | + | 1364705 - 1364781 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 1364876 - 1366404 | Not Available |
| proline--trna ligase | NQ491_05490 | Q5LCF0 | - | 1367266 - 1368750 | 56001.1 |
| hypothetical protein | NQ491_05495 | Not Available | + | 1369116 - 1370303 | 41887.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.