Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyruvate, phosphate dikinase | NQ491_05200 | P22983 | + | 1287637 - 1290375 | 100658.0 |
| tyrosine-type recombinase/integrase | NQ491_05205 | Not Available | - | 1290566 - 1291171 | 22454.6 |
| alpha/beta hydrolase | NQ491_05210 | Q9JUV1 | - | 1291804 - 1292727 | 35401.3 |
| duf4302 domain-containing protein | NQ491_05215 | Not Available | - | 1293098 - 1294537 | 53850.5 |
| putative zinc-binding metallopeptidase | NQ491_05220 | Not Available | - | 1294573 - 1295514 | 35742.3 |
| ragb/susd family nutrient uptake outer membrane protein | NQ491_05225 | Not Available | - | 1295540 - 1297246 | 62965.0 |
| susc/raga family tonb-linked outer membrane protein | NQ491_05230 | T2KM18 | - | 1297290 - 1300637 | 124672.0 |
| hypothetical protein | NQ491_05235 | A1R7G4 | - | 1301178 - 1301708 | 19444.9 |
| 30s ribosomal protein s16 | NQ491_05240 | B2RH41 | - | 1301723 - 1302283 | 20010.7 |
| formate/nitrite transporter family protein | NQ491_05245 | Q50568 | + | 1302621 - 1303418 | 27897.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.