Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | NQ491_05150 | A6TBH3 | - | 1272821 - 1273864 | 38030.6 |
| doxx protein | NQ491_05155 | Not Available | - | 1274232 - 1275476 | 46570.9 |
| thymidylate kinase | NQ491_05160 | P9WKE0 | - | 1276278 - 1276979 | 26589.9 |
| cysteine desulfurase | NQ491_05165 | A9MEP3 | - | 1277210 - 1278433 | 44387.2 |
| fe-s cluster assembly protein sufd | NQ491_05170 | Q55792 | - | 1278433 - 1279737 | 47143.3 |
| fe-s cluster assembly atpase sufc | NQ491_05175 | Q55791 | - | 1279743 - 1280492 | 27577.5 |
| fe-s cluster assembly protein sufb | NQ491_05180 | Q55790 | - | 1280695 - 1282140 | 53494.5 |
| tetratricopeptide repeat protein | NQ491_05185 | Not Available | - | 1282318 - 1283625 | 48917.7 |
| dna gyrase subunit a | NQ491_05190 | P0C0R0 | - | 1283646 - 1286189 | 94958.2 |
| hypothetical protein | NQ491_05195 | Not Available | + | 1286506 - 1287480 | 36738.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.