Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes ihumii |
| Strain | AP11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gut |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes ihumii AP11
Accession NumberCP102294.1
Gene Summary
Adenine Count
588608 bp
Thymine Count
582180 bp
Guanine Count
802418 bp
Cytosine Count
806809 bp
Genome Length
2780015 bp
Protein-coding Genes
2174 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | NQ491_05100 | Q8A155 | + | 1256856 - 1258376 | 55229.8 |
| rod shape-determining protein | NQ491_05105 | P39751 | + | 1258454 - 1259473 | 36419.6 |
| rod shape-determining protein mrec | NQ491_05110 | Q8Y6Y4 | + | 1259496 - 1260353 | 31372.2 |
| rod shape-determining protein mred | NQ491_05115 | Not Available | + | 1260679 - 1261194 | 18918.2 |
| penicillin-binding protein 2 | NQ491_05120 | P44469 | + | 1261198 - 1263024 | 68120.6 |
| rod shape-determining protein roda | NQ491_05125 | O83514 | + | 1262999 - 1264435 | 52928.8 |
| aaa family atpase | NQ491_05130 | Not Available | + | 1264459 - 1264710 | 8856.54 |
| calcium-translocating p-type atpase, pmca-type | NQ491_05135 | Q9LIK7 | + | 1265256 - 1267817 | 93285.6 |
| tolc family protein | NQ491_05140 | Q03027 | - | 1268437 - 1269717 | 48155.2 |
| efflux rnd transporter permease subunit | NQ491_05145 | A7MHJ1 | - | 1269730 - 1272813 | 113235.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.