Rhodococcus qingshengii djl-6

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcus

Description

Rhodococcus qingshengii djl-6 is a notable bacterium characterized by the presence of flagella, which suggests that it is motile. This motility could play a significant role in its ecological interactions and ability to colonize various environments. The genome of R. qingshengii djl-6 consists of six replicons, indicating a complex genetic architecture that may contribute to its adaptability and metabolic versatility. The genomic data for R. qingshengii djl-6 are recorded under several accessions: CP096563.1, CP096564.1, CP096565.1, CP096566.1, CP096567.1, and CP096568.1. These accessions provide a foundation for further genetic and functional analysis of this species. Given its motility and genomic complexity, R. qingshengii djl-6 may be well-suited for diverse ecological niches, potentially allowing it to engage in various biogeochemical processes. The presence of multiple replicons is often associated with the ability to metabolize a wide range of substrates, which could enhance its survival and ecological role in environments where it is found. Understanding these traits can provide insights into the ecological dynamics of Rhodococcus species and their potential applications in bioremediation or other biotechnological fields.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcus
SpeciesRhodococcus qingshengii
Straindjl-6

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcus qingshengii djl-6


Gene Summary

Adenine Count

56329 bp

Thymine Count

54738 bp

Guanine Count

85478 bp

Cytosine Count

91854 bp

Genome Length

288399 bp

Protein-coding Genes

266 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive3553541 - 3553552Not Available
bppu family phage baseplate upper proteinM0639_16185Not AvailableNegative3555025 - 355534211819.0
Transposase/is proteinM0639_16190P15026Negative3555635 - 355642928602.4
Is21 transposaseM0639_16195Q99335Negative3556426 - 355797056719.1
Structural proteinM0639_16200Not AvailableNegative3558031 - 355890930441.0
Hypothetical proteinM0639_16205Not AvailableNegative3558909 - 355930414465.7
Major capsid proteinM0639_16210Not AvailableNegative3559443 - 356031831600.4
phage scaffolding proteinM0639_16215Not AvailableNegative3560448 - 356085815065.5
Portal proteinM0639_16220Not AvailableNegative3560855 - 356221051019.9
Hypothetical proteinM0639_16225Not AvailableNegative3562277 - 356354248473.2

Displaying genes 1 – 10 of 6983 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.