Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 28 protein | NQ519_03520 | A7PZL3 | + | 909825 - 911360 | 55771.9 |
| glycosyl hydrolase family 28 protein | NQ519_03525 | A7PZL3 | + | 911357 - 912787 | 52326.6 |
| acetylxylan esterase | NQ519_03530 | O34973 | + | 912793 - 914220 | 54079.1 |
| two component regulator | NQ519_03535 | Not Available | + | 914240 - 915025 | 27822.7 |
| ig-like domain-containing protein | NQ519_03540 | P35838 | + | 915056 - 917143 | 74848.7 |
| hypothetical protein | NQ519_03545 | Not Available | + | 917204 - 919132 | 74018.6 |
| glycosyl hydrolase family 28 protein | NQ519_03550 | A7PZL3 | + | 919226 - 921130 | 70245.2 |
| polysaccharide lyase 11 | NQ519_03555 | O31527 | + | 921149 - 922540 | 52611.2 |
| glycoside hydrolase family 88 protein | NQ519_03560 | O34559 | + | 922545 - 924257 | 65197.5 |
| hypothetical protein | NQ519_03565 | Not Available | - | 924386 - 924841 | 17568.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.