Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 2 | NQ519_03470 | T2KPJ7 | + | 885226 - 887883 | 99931.8 |
| rna polymerase sigma-70 factor | NQ519_03475 | P0AGB8 | + | 887898 - 888434 | 21039.4 |
| glycoside hydrolase | NQ519_03480 | Q59140 | - | 888475 - 891063 | 97599.4 |
| duf4982 domain-containing protein | NQ519_03485 | T2KN75 | - | 891064 - 893433 | 89312.8 |
| atp-binding protein | NQ519_03490 | T2KMF4 | - | 893525 - 897574 | 151226.0 |
| glycoside hydrolase | NQ519_03495 | A0KQH4 | + | 897722 - 900730 | 112001.0 |
| tonb-dependent receptor | NQ519_03500 | T2KPJ3 | + | 900826 - 903972 | 116800.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_03505 | T2KNB8 | + | 903988 - 905544 | 59329.3 |
| formylglycine-generating enzyme family protein | NQ519_03510 | Q7AJA5 | + | 905567 - 906649 | 39902.7 |
| duf4982 domain-containing protein | NQ519_03515 | T2KN75 | + | 906677 - 909823 | 119119.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.