Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| response regulator | LK406_15570 | T2KMF4 | + | 3861412 - 3865383 | 149187.0 |
| tonb-dependent receptor | LK406_15575 | T2KPJ3 | + | 3865703 - 3868726 | 111951.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_15580 | T2KNB8 | + | 3868740 - 3870434 | 64312.4 |
| suse domain-containing protein | LK406_15585 | Not Available | + | 3870545 - 3871795 | 45995.9 |
| duf4832 domain-containing protein | LK406_15590 | Not Available | + | 3871914 - 3873485 | 58612.5 |
| fad-dependent oxidoreductase | LK406_15595 | Q1GP63 | + | 3873499 - 3875370 | 68938.9 |
| alpha-galactosidase | LK406_15600 | P16551 | + | 3875402 - 3877474 | 78105.0 |
| beta galactosidase jelly roll domain-containing protein | LK406_15605 | T2KPJ7 | + | 3877496 - 3879280 | 68480.3 |
| glycoside hydrolase family 88 protein | LK406_15610 | T2KLZ3 | + | 3879293 - 3880480 | 45077.0 |
| acetylxylan esterase | LK406_15615 | A0A0K2VM55 | + | 3880477 - 3881739 | 46676.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.