Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | NQ519_02820 | P0AFQ4 | + | 717555 - 718646 | 39318.4 |
| abc transporter permease | NQ519_02825 | P0AFQ0 | + | 718827 - 719930 | 40777.6 |
| tetr/acrr family transcriptional regulator | NQ519_02830 | Not Available | + | 719952 - 720530 | 21758.9 |
| glycoside hydrolase family 127 protein | NQ519_02835 | E8MGH8 | - | 720625 - 722646 | 76189.8 |
| mfs transporter | NQ519_02840 | Q9Z7N9 | - | 722666 - 724039 | 48769.7 |
| endonuclease/exonuclease/phosphatase family protein | NQ519_02845 | Q5UQW5 | - | 724077 - 724961 | 33516.3 |
| sigma-70 family rna polymerase sigma factor | NQ519_02850 | P23484 | - | 724990 - 725508 | 20272.5 |
| calcineurin-like phosphoesterase family protein | NQ519_02855 | Not Available | - | 725609 - 727066 | 55521.4 |
| hypothetical protein | NQ519_02860 | Not Available | - | 727079 - 728896 | 62124.1 |
| calcineurin-like phosphoesterase family protein | NQ519_02865 | Not Available | - | 728921 - 730447 | 57164.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.