Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| endopeptidase la | NQ519_02220 | A5FG89 | - | 550447 - 552873 | 89638.5 |
| valine--trna ligase | NQ519_02225 | A6LIG7 | + | 552987 - 555614 | 99448.9 |
| ribonuclease hi | NQ519_02230 | A4J7B3 | + | 555791 - 556255 | 17323.6 |
| abc transporter atp-binding protein/permease | NQ519_02235 | Q2LVL0 | + | 556545 - 558374 | 68176.9 |
| hamp domain-containing histidine kinase | NQ519_02240 | Q03228 | + | 558427 - 559911 | 55942.8 |
| isoleucine--trna ligase | NQ519_02245 | Q5LCU8 | + | 560024 - 563419 | 127959.0 |
| trar/dksa c4-type zinc finger protein | NQ519_02250 | P42408 | + | 563499 - 563879 | 14413.3 |
| hypothetical protein | NQ519_02255 | Q9K1H0 | + | 564077 - 565912 | 70038.6 |
| atpase | NQ519_02260 | Not Available | + | 566136 - 566957 | 29600.3 |
| n-acetylmuramic acid 6-phosphate etherase | NQ519_02265 | B2RK20 | + | 566947 - 567771 | 29795.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.