Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome silencing factor | NQ519_02170 | Q9KD89 | - | 541903 - 542253 | 13132.7 |
| hydrogen peroxide-inducible genes activator | NQ519_02175 | Q9X725 | - | 542574 - 543473 | 33417.7 |
| tryptophan--trna ligase | NQ519_02180 | Q46127 | + | 543681 - 544811 | 42083.3 |
| chloride channel protein | NQ519_02185 | Q8XTT4 | + | 544898 - 546679 | 65846.6 |
| pas domain-containing protein | NQ519_02190 | Not Available | + | 546682 - 547020 | 12784.4 |
| ycii family protein | NQ519_02195 | Not Available | - | 547052 - 547336 | 10573.7 |
| kpsf/gutq family sugar-phosphate isomerase | NQ519_02200 | Q8FDQ2 | - | 547344 - 548309 | 34389.0 |
| 3-deoxy-8-phosphooctulonate synthase | NQ519_02205 | Q31KV0 | - | 548310 - 549062 | 26951.6 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | NQ519_02210 | A6L5J0 | - | 549305 - 550063 | 28219.6 |
| mmcq/yjbr family dna-binding protein | NQ519_02215 | P0AAT3 | - | 550060 - 550446 | 15112.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.