Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | NQ519_01470 | T2KM18 | - | 378494 - 381565 | 113007.0 |
| ragb/susd family nutrient uptake outer membrane protein | NQ519_01475 | Not Available | - | 381585 - 383441 | 70092.8 |
| tonb-dependent receptor | NQ519_01480 | T2KPJ3 | - | 383463 - 386735 | 121624.0 |
| glycoside hydrolase family 2 | NQ519_01485 | B8NW36 | + | 387595 - 390003 | 91887.8 |
| rok family protein | NQ519_01490 | Q9X1I0 | + | 390028 - 390990 | 34077.9 |
| sis domain-containing protein | NQ519_01495 | A7ZHY1 | + | 391003 - 391581 | 20692.0 |
| ig-like domain-containing protein | NQ519_01500 | P85991 | + | 391618 - 393570 | 70578.6 |
| alpha-galactosidase | NQ519_01505 | P43467 | + | 393605 - 395692 | 79787.6 |
| alpha-galactosidase | NQ519_01510 | P43467 | + | 395706 - 397784 | 78270.5 |
| mbl fold metallo-hydrolase | NQ519_01515 | Not Available | + | 397789 - 398658 | 32710.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.