Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| toprim domain-containing protein | NQ519_04670 | P0A118 | - | 1204014 - 1204967 | 36329.6 |
| duf5906 domain-containing protein | NQ519_04675 | Not Available | - | 1205150 - 1206373 | 47798.4 |
| helix-turn-helix domain-containing protein | NQ519_04680 | Not Available | - | 1206363 - 1206668 | 11544.9 |
| hypothetical protein | NQ519_04685 | Not Available | - | 1206881 - 1207636 | 28713.5 |
| nucleotidyl transferase abieii/abigii toxin family protein | NQ519_04690 | Not Available | - | 1207639 - 1208652 | 39886.6 |
| duf6088 family protein | NQ519_04695 | Not Available | - | 1208642 - 1209250 | 22782.3 |
| site-specific integrase | NQ519_04700 | B5YFZ8 | - | 1209308 - 1210711 | 53907.9 |
| sdr family oxidoreductase | NQ519_04705 | O31767 | + | 1210981 - 1211772 | 29287.1 |
| rna polymerase sigma-70 factor | NQ519_04710 | Q45585 | + | 1211890 - 1212477 | 22250.9 |
| fecr domain-containing protein | NQ519_04715 | Not Available | + | 1212547 - 1213491 | 35026.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.