Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(+)/nadh kinase | NQ519_04470 | A6H1D1 | + | 1147655 - 1148533 | 31351.8 |
| polyprenyl diphosphate synthase | NQ519_04475 | Q8UFL9 | + | 1148589 - 1149302 | 26781.7 |
| outer membrane protein assembly factor bama | NQ519_04480 | Q9K1H0 | + | 1149330 - 1151870 | 96461.1 |
| omph family outer membrane protein | NQ519_04485 | Not Available | + | 1151966 - 1152475 | 19057.8 |
| omph family outer membrane protein | NQ519_04490 | Not Available | + | 1152503 - 1153045 | 20247.2 |
| helix-turn-helix domain-containing protein | NQ519_04495 | P11765 | + | 1153245 - 1154156 | 34508.5 |
| bama/tama family outer membrane protein | NQ519_04500 | Q9K1H0 | - | 1154313 - 1156715 | 91975.6 |
| nitroreductase family protein | NQ519_04505 | O30013 | - | 1156720 - 1157466 | 28166.8 |
| diaminopimelate epimerase | NQ519_04510 | A6GYX5 | + | 1157599 - 1158405 | 29183.3 |
| hypothetical protein | NQ519_04515 | Not Available | + | 1158425 - 1158619 | 7665.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.