Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lptf/lptg family permease | LK406_16120 | Not Available | - | 4009698 - 4011200 | 56785.6 |
| metal abc transporter permease | LK406_16125 | P73087 | - | 4011197 - 4012030 | 29094.5 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | LK406_16130 | P54462 | + | 4012130 - 4013428 | 47678.1 |
| hypothetical protein | LK406_16135 | Not Available | + | 4013486 - 4014289 | 29769.4 |
| trkh family potassium uptake protein | LK406_16140 | Q9L6L2 | + | 4014294 - 4015739 | 52616.5 |
| spor domain-containing protein | LK406_16145 | Not Available | + | 4015736 - 4017295 | 58008.6 |
| nfed family protein | LK406_16150 | Not Available | + | 4017338 - 4017808 | 17015.2 |
| flotillin-like protein floa | LK406_16155 | A6LDT3 | + | 4017821 - 4018792 | 34732.7 |
| esterase family protein | LK406_16160 | P23553 | + | 4018860 - 4019678 | 30941.8 |
| cdgsh iron-sulfur domain-containing protein | LK406_16165 | Not Available | - | 4019716 - 4020483 | 28341.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.