Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LK406_15670 | Not Available | + | 3899833 - 3900738 | 33448.4 |
| 2-isopropylmalate synthase | LK406_15675 | A6LDN1 | + | 3900906 - 3902426 | 55303.1 |
| 3-isopropylmalate dehydratase large subunit | LK406_15680 | Q8A6L7 | + | 3902428 - 3903804 | 49288.9 |
| 3-isopropylmalate dehydratase small subunit | LK406_15685 | Q11NN7 | + | 3903817 - 3904410 | 21982.8 |
| 2-isopropylmalate synthase | LK406_15690 | Q8F3Q1 | + | 3904420 - 3905961 | 57129.1 |
| 3-isopropylmalate dehydrogenase | LK406_15695 | Q8A6M0 | + | 3905951 - 3907012 | 37883.4 |
| gtpase obge | LK406_15700 | A6LD68 | + | 3907304 - 3908317 | 36678.6 |
| duf5689 domain-containing protein | LK406_15705 | Not Available | - | 3908352 - 3909149 | 28327.2 |
| duf5689 domain-containing protein | LK406_15710 | Not Available | - | 3909127 - 3909897 | 27358.2 |
| phosphoserine phosphatase serb | LK406_15715 | Q9S281 | - | 3909904 - 3911127 | 45340.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.