Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes senegalensis |
| Strain | JC50 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Alistipes senegalensis JC50
Accession NumberCP102252.1
Gene Summary
Adenine Count
843355 bp
Thymine Count
833767 bp
Guanine Count
1170539 bp
Cytosine Count
1175536 bp
Genome Length
4023197 bp
Protein-coding Genes
3164 genes
Non-Coding Genes
72 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-glucuronidase | LK406_15620 | Q56307 | + | 3881761 - 3884478 | 103858.0 |
| hypothetical protein | LK406_15625 | P48982 | + | 3884491 - 3885264 | 28231.5 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | LK406_15630 | Q56078 | + | 3885291 - 3887495 | 80913.2 |
| tonb-dependent receptor | LK406_15635 | Not Available | + | 3887685 - 3890108 | 90467.8 |
| alanine dehydrogenase | LK406_15640 | Q6LX40 | + | 3890199 - 3891305 | 39627.2 |
| hypothetical protein | LK406_15645 | Not Available | + | 3891692 - 3891832 | 5129.42 |
| hypothetical protein | LK406_15650 | Not Available | + | 3892135 - 3893148 | 36071.8 |
| hypothetical protein | LK406_15655 | Not Available | + | 3893183 - 3894952 | 62384.4 |
| tonb-dependent receptor | LK406_15660 | T2KPJ3 | + | 3895050 - 3898169 | 114341.0 |
| ragb/susd family nutrient uptake outer membrane protein | LK406_15665 | Not Available | + | 3898176 - 3899819 | 61774.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.